Phylogeny and function on assembly graphs

Advisor: Daniel Huson

PhD Program: International Max Planck Research School (IMPRS) 'From Molecules to Organisms'
Location: University of Tübingen - Interfaculty Institute for Biomedical Informatics (IBMI)

Project description

Phylogenetic classification, taxonomic binning and functional analysis is usually performed on assembled sequences.
The focus of this bioinformatics project is to adapt existing algorithms, and to develop new algorithms, to run on an assembly graph, in particular for microbiome assemblies.

More information on Daniel Huson and a selection of recent publications can be found on his faculty page.

 

Requirements
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Application deadline: 6 February 2022

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